tdbR00000388 (deprecated)

NameValue
Coding AA: Ser
Anticodon sequence: GCU
Organism: Bacillus subtilis NCBI:txid1423
RNA type: cytoplasmic
Sequence: GGAGAAGUACUCAAGUGGCDGA"GAGGCGCCCCUGCU6AGGGUGUAGGUCGCGUAAGCGGCGCGAGGGTPCAAAUCCCUCCUUCUCCGCCA
Unmodified sequence: GGAGAAGUACUCAAGUGGCUGAAGAGGCGCCCCUGCUAAGGGUGUAGGUCGCGUAAGCGGCGCGAGGGUUCAAAUCCCUCCUUCUCCGCCA
Secondary structure: (((((((..(((...........)))((((((.......)))))).................(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 22, 2019
Folding free energy [kcal/mol]: 100000.00
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGAGAAGUACUCAAGU--GGCDGA"GAGGCGCCCCUGCU6AGGGUGU_GUCGC--GUAA---GCGGCG-CGAGGGTPCAAAUCCCUCCUUCUCCGCCA
.(((((((..(((.............)))((((((.......)))))).......................(((((.......))))))))))))....
Publications:
  • Nucleotide sequences of serine tRNAs from Bacillus subtilis.
    J Matsugi, H T Jia, K Murao, H Ishikura
    Biochimica et biophysica acta
    volume: 1130 issue: 3 date: April 6, 1992 PUBMED ID: 1373329
Next entry: tdbR00000388 (Sept. 23, 2019, 3:11 p.m.)
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