tdbR00000514

Name	Value
Coding AA:	Ini
Anticodon sequence:	CAU
Organism:	Scenedesmus obliquus NCBI:txid3088
RNA type:	plastid
Sequence:	CGCAGGAUAGAGCAGUCU#GDAGCUCRPGGGGCUCAUAAPCCCAAU7DCGCAGGTPCAAAUCCUGCUCCUGCAACCA
Unmodified sequence:	CGCAGGAUAGAGCAGUCUGGUAGCUCGUGGGGCUCAUAAUCCCAAUGUCGCAGGUUCAAAUCCUGCUCCUGCAACCA
Secondary structure:	.((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))).....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-26.30
Pre-aligned sequence: Pre-aligned secondary structure:	-CGCAGGAUAGAGCAGUCU#GD--AGCUCRPGGGGCUCAUAAPCCCAAU-------------------7DCGCAGGTPCAAAUCCUGCUCCUGCAACCA ..((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))).....
Publications:	The nucleotide sequence of Scenedesmus obliquus chloroplast tRNAfMet. J M McCoy, D S Jones Nucleic acids research volume: 8 issue: 21 date: Nov. 11, 1980 PUBMED ID: 7443533

Model based on:

Moderna

RNA Composer