tdbR00000278

NameValue
Coding AA: Met
Anticodon sequence: CAU
Organism: Scenedesmus obliquus NCBI:txid3088
RNA type: plastid
Sequence: GCCUGCUPAGCUCAGUD#GCCAGAGCAUCCGPPUCAU/CGCGGAAA7DCACUAGTPCGAAUCUAGUAGCAGGCACCA
Unmodified sequence: GCCUGCUUAGCUCAGUUGGCCAGAGCAUCCGUUUCAUACGCGGAAAGUCACUAGUUCGAAUCUAGUAGCAGGCACCA
Secondary structure: (((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -25.50
Pre-aligned sequence:
Pre-aligned secondary structure:
-GCCUGCUPAGCUCAGUD-#GCC-AGAGCAUCCGPPUCAU/CGCGGAAA-------------------7DCACUAGTPCGAAUCUAGUAGCAGGCACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • The nucleotide sequence of Scenedesmus obliquus chloroplast elongator methionine-accepting tRNA.
    J M McCoy, N M Keene, D S Jones
    The Biochemical journal
    volume: 238 issue: 1 date: Aug. 15, 1986 PUBMED ID: 3643021
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