tdbR00000081

NameValue
Coding AA: Phe
Anticodon sequence: GAA
Organism: Scenedesmus obliquus NCBI:txid3088
RNA type: cytoplasmic
Sequence: GGCUUGAUALCUCAGCD#GGAGAGCRPPAGABUGAAKAPCUACAG7.?CCCAGTPCG"U?BUGGGUCAGGCCACCA
Unmodified sequence: GGCUUGAUAGCUCAGCUGGGAGAGCGUUAGACUGAAGAUCUACAGG_CCCCAGUUCGAUCCUGGGUCAGGCCACCA
Secondary structure: (((((((..((((........))))..((((.......))))......(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -22.20
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGCUUGAUALCUCAGCD-#GG--AGAGCRPPAGABUGAAKAPCUACAG-------------------7.?CCCAGTPCG"U?BUGGGUCAGGCCACCA
.(((((((..((((...........))))..((((.......)))).........................(((((.......))))))))))))....
Publications:
  • The nucleotide sequence of a cytoplasmic tRNAPhe from Scenedesmus obliquus and comparison with a tRNATyr species.
    G A Green, D S Jones
    The Biochemical journal
    volume: 236 issue: 2 date: June 1, 1986 PUBMED ID: 3638966
Comments: 47 . IS A MODIFIED NUCLEOTIDE
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