tdbR00000085

NameValue
Coding AA: Phe
Anticodon sequence: #AA
Organism: Schizosaccharomyces pombe NCBI:txid4896
RNA type: cytoplasmic
Sequence: GUCGCAAU;LUGPAGDDGGGAGCAPLACAGABU#AAYAPCUGUUG7NCAUCGGTPCGAUCCCGGUUUGUGACACCA
Unmodified sequence: GUCGCAAUGGUGUAGUUGGGAGCAUGACAGACUGAAGAUCUGUUGGUCAUCGGUUCGAUCCCGGUUUGUGACACCA
Secondary structure: (((((((..((((........))))((((((.......))))))....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:		 Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -17.30
Pre-aligned sequence:
Pre-aligned secondary structure:		 -GUCGCAAU;LUGPAGDD-GGG--AGCAPLACAGABU#AAYAPCUGUUG-------------------7NCAUCGGTPCGAUCCCGGUUUGUGACACCA
.(((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))))....
Publications:
  • Nucleotide sequence of phenylalanine transfer RNA from Schizosaccharomyces pombe: implications for transfer RNA recognition by yeast phenylalanyl-tRNA synthetase.
    T McCutchan, S Silverman, J Kohli, D Söll
    Biochemistry
    volume: 17 issue: 9 date: May 2, 1978 PUBMED ID: 247991
  • Nucleotide sequence of phenylalanine transfer RNA from Schizosaccharomyces pombe: implications for transfer RNA recognition by yeast phenylalanyl-tRNA synthetase.
    T McCutchan, S Silverman, J Kohli, D Söll
    Biochemistry
    volume: 17 issue: 9 date: May 2, 1978 PUBMED ID: 247991
Comments: 10 IS PROBABLY L; 26 IS PROBABLY L; 47 IS PROBABLY A MODIFIED U; 40 IS PROBABLY A NOT MODIFIED C AND NOT m5C = ?
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