tdbR00000085

Name	Value
Coding AA:	Phe
Anticodon sequence:	#AA
Organism:	Schizosaccharomyces pombe NCBI:txid4896
RNA type:	cytoplasmic
Sequence:	GUCGCAAU;LUGPAGDDGGGAGCAPLACAGABU#AAYAPCUGUUG7NCAUCGGTPCGAUCCCGGUUUGUGACACCA
Unmodified sequence:	GUCGCAAUGGUGUAGUUGGGAGCAUGACAGACUGAAGAUCUGUUGGUCAUCGGUUCGAUCCCGGUUUGUGACACCA
Secondary structure:	(((((((..((((........))))((((((.......))))))....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-17.30
Pre-aligned sequence: Pre-aligned secondary structure:	-GUCGCAAU;LUGPAGDD-GGG--AGCAPLACAGABU#AAYAPCUGUUG-------------------7NCAUCGGTPCGAUCCCGGUUUGUGACACCA .(((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	Nucleotide sequence of phenylalanine transfer RNA from Schizosaccharomyces pombe: implications for transfer RNA recognition by yeast phenylalanyl-tRNA synthetase. T McCutchan, S Silverman, J Kohli, D Söll Biochemistry volume: 17 issue: 9 date: May 2, 1978 PUBMED ID: 247991
Comments:	10 IS PROBABLY L; 26 IS PROBABLY L; 47 IS PROBABLY A MODIFIED U; 40 IS PROBABLY A NOT MODIFIED C AND NOT m5C = ?

Model based on:

Moderna

RNA Composer