tdbR00000612

NameValue
Coding AA: Trp
Anticodon sequence: CCA
Organism: Sinorhizobium meliloti NCBI:txid382
RNA type: cytoplasmic
Sequence: AGGGGUAUAGCUCAGUUGGUAGAGCGGCGGUCUCCAAAACCGCAGGUCGGGGGUUCGAGCCCCUCUGCCCCUGCCA
Unmodified sequence: AGGGGUAUAGCUCAGUUGGUAGAGCGGCGGUCUCCAAAACCGCAGGUCGGGGGUUCGAGCCCCUCUGCCCCUGCCA
Secondary structure: (((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -29.10
Pre-aligned sequence:
Pre-aligned secondary structure:
-AGGGGUAUAGCUCAGUU-GGU--AGAGCGGCGGUCUCCAAAACCGCAG-------------------GUCGGGGGUUCGAGCCCCUCUGCCCCUGCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Loss of a universal tRNA feature.
    Chunxia Wang, Bruno W Sobral, Kelly P Williams
    Journal of bacteriology
    volume: 189 issue: 5 epub: Dec. 15, 2006 PUBMED ID: 17172343
Comments: MODIFIED NUCLEOTIDES WERE NOT DETERMINED
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