tdbR00000482

NameValue
Coding AA: Trp
Anticodon sequence: CCA
Organism: Spiroplasma citri NCBI:txid2133
RNA type: cytoplasmic
Sequence: AGGGGUGUAGUUUAAUGGUAGAACAGCGGUCUCCAHCACCGUACGUUGUGGGUPCAAGUCCUGUCACCCCUGCCA
Unmodified sequence: AGGGGUGUAGUUUAAUGGUAGAACAGCGGUCUCCAACACCGUACGUUGUGGGUUCAAGUCCUGUCACCCCUGCCA
Secondary structure: (((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -16.30
Pre-aligned sequence:
Pre-aligned secondary structure:
-AGGGGUGUAGUUUAAU--GGU--AGAACAGCGGUCUCCAHCACCGUAC-------------------GUUGUGGGUPCAAGUCCUGUCACCCCUGCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Spiroplasma citri UGG and UGA tryptophan codons: sequence of the two tryptophanyl-tRNAs and organization of the corresponding genes.
    C Citti, L Maréchal-Drouard, C Saillard, J H Weil, J M Bové
    Journal of bacteriology
    volume: 174 issue: 20 PUBMED ID: 1383193
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