tdbR00000549

NameValue
Coding AA: Tyr
Anticodon sequence: QUA
Organism: Tetrahymena pyriformis NCBI:txid5908
RNA type: mitochondrial
Sequence: GAGAUGGUGLCUGAGUGGDDAAAGCRGPAGACUQUAHAPCPAUJGGGUAUCCGUCGUCGGTPCGAGUCCGAUCCAUCUCACCA
Unmodified sequence: GAGAUGGUGGCUGAGUGGUUAAAGCGGUAGACUGUAAAUCUAUUGGGUAUCCGUCGUCGGUUCGAGUCCGAUCCAUCUCACCA
Secondary structure: (((((((..(((..........)))((((((.......))))))...........(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -19.50
Pre-aligned sequence:
Pre-aligned secondary structure:
-GAGAUGGUGLCUGAGU--GGDD-AAAGCRGPAGACUQUAHAPCPAUJ-GGG----UA-------UCCGUCGUCGGTPCGAGUCCGAUCCAUCUCACCA
.(((((((..(((.............)))((((((.......)))))).......................(((((.......))))))))))))....
Publications:
  • Phenylalanine and tyrosine transfer RNAs encoded by Tetrahymena pyriformis mitochondrial DNA: primary sequence, post-transcriptional modifications, and gene localization.
    M N Schnare, T Y Heinonen, P G Young, M W Gray
    Current genetics
    volume: 9 issue: 5 PUBMED ID: 3939713
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