tdbR00000523

NameValue
Coding AA: Ini
Anticodon sequence: CAU
Organism: Tetrahymena thermophila NCBI:txid5911
RNA type: cytoplasmic
Sequence: AGCAGGGUKGCGAAAD#GAAUCGCGUPGGGCUCAU6ACPCAAAA7U?AGAGGAPCG"AACCUCUCUCUGCUACCA
Unmodified sequence: AGCAGGGUGGCGAAAUGGAAUCGCGUUGGGCUCAUAACUCAAAAGUCAGAGGAUCGAAACCUCUCUCUGCUACCA
Secondary structure: (((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -19.70
Pre-aligned sequence:
Pre-aligned secondary structure:
-AGCAGGGUKGCGAAAD--#GA--AUCGCGUPGGGCUCAU6ACPCAAAA-------------------7U?AGAGGAPCG"AACCUCUCUCUGCUACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Nucleotide sequence of cytoplasmic initiator tRNA from Tetrahymena thermophila.
    Y Kuchino, T Mita, S Nishimura
    Nucleic acids research
    volume: 9 issue: 18 date: Sept. 25, 1981 PUBMED ID: 7301582
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