tdbR00000157

NameValue
Coding AA: Ile
Anticodon sequence: GAU
Organism: Thermus thermophilus NCBI:txid274
RNA type: cytoplasmic
Sequence: GGGCGAUUAGCUCAGCU#GUDAGAGCGCACGCCUGAU6AGCGUGAG7UCGGUGGFPCA"GUCCACCAUCGCCCACCA
Unmodified sequence: GGGCGAUUAGCUCAGCUGGUUAGAGCGCACGCCUGAUAAGCGUGAGGUCGGUGGUUCAAGUCCACCAUCGCCCACCA
Secondary structure: (((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -30.80
Pre-aligned sequence:
Pre-aligned secondary structure:
-GGGCGAUUAGCUCAGCU-#GUD-AGAGCGCACGCCUGAU6AGCGUGAG-------------------7UCGGUGGFPCA"GUCCACCAUCGCCCACCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Two tRNAIle1 species from an extreme thermophile, Thermus thermophilus HB8: effect of 2-thiolation of ribothymidine on the thermostability of tRNA.
    N Horie, M Hara-Yokoyama, S Yokoyama, K Watanabe, Y Kuchino, S Nishimura, T Miyazawa
    Biochemistry
    volume: 24 issue: 21 date: Oct. 8, 1985 PUBMED ID: 3853464
Comments: 54 PARTIALLY T
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