tdbR00000509

NameValue
Coding AA: Ini
Anticodon sequence: CAU
Organism: Thermus thermophilus NCBI:txid274
RNA type: cytoplasmic
Sequence: CGCGGGG4GGAGCAGCCU#GDAGCUCGUCGGGBUCAUAACCCGAAG7UCGCGGGFPCA"AUCCCGCCCCCGCAACCA
Unmodified sequence: CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGCGGGUUCAAAUCCCGCCCCCGCAACCA
Secondary structure: .((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))).....
Homology model or
structure extracted from PDB:
Model (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -33.00
Pre-aligned sequence:
Pre-aligned secondary structure:
-CGCGGGG4GGAGCAGCCU#GD--AGCUCGUCGGGBUCAUAACCCGAAG-------------------7UCGCGGGFPCA"AUCCCGCCCCCGCAACCA
..((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))).....
Publications:
  • Nucleotide sequence of formylmethionine tRNA from an extreme thermophile, Thermus thermophilus HB8.
    K Watanabe, Y Kuchino, Z Yamaizumi, M Kato, T Oshima, S Nishimura
    Journal of biochemistry
    volume: 86 issue: 4 PUBMED ID: 115855
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