tdbR00000620

NameValue
Coding AA: Ini
Anticodon sequence: CAU
Organism: Toxoplasma gondii NCBI:txid5811
RNA type: cytoplasmic
Sequence: AGCACCGUAGCUCAGUGGGAGAGUGGGGGGCUCAUAACCCCCAGGUCCAUGGAUCGAAACCAUGCGGUGCUA
Unmodified sequence: AGCACCGUAGCUCAGUGGGAGAGUGGGGGGCUCAUAACCCCCAGGUCCAUGGAUCGAAACCAUGCGGUGCUA
Secondary structure: (((((((..((((.......)))).(((((.......))))).....(((((.......)))))))))))).
Homology model or
structure extracted from PDB:		 Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -27.70
Pre-aligned sequence:
Pre-aligned secondary structure:		 -AGCACCGUAGCUCAGU--GGG--AGAGUGGGGGGCUCAUAACCCCCAG-------------------GUCCAUGGAUCGAAACCAUGCGGUGCUA---
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • Mitochondrial tRNA import in Toxoplasma gondii.
    Anne Crausaz Esseiva, Arunasalam Naguleswaran, Andrew Hemphill, André Schneider
    The Journal of biological chemistry
    volume: 279 issue: 41 date: Oct. 8, 2004 epub: July 27, 2004 PUBMED ID: 15280394
Comments: CYTOSOL SPECIFIC- NOT IMPORTED TO MITOCHONDRIA;MODIFIED NUCLEOTIDES WERE NOT DETERMINED
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