tdbR00000620

Name	Value
Coding AA:	Ini
Anticodon sequence:	CAU
Organism:	Toxoplasma gondii NCBI:txid5811
RNA type:	cytoplasmic
Sequence:	AGCACCGUAGCUCAGUGGGAGAGUGGGGGGCUCAUAACCCCCAGGUCCAUGGAUCGAAACCAUGCGGUGCUA
Unmodified sequence:	AGCACCGUAGCUCAGUGGGAGAGUGGGGGGCUCAUAACCCCCAGGUCCAUGGAUCGAAACCAUGCGGUGCUA
Secondary structure:	(((((((..((((.......)))).(((((.......))))).....(((((.......)))))))))))).
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-27.70
Pre-aligned sequence: Pre-aligned secondary structure:	-AGCACCGUAGCUCAGU--GGG--AGAGUGGGGGGCUCAUAACCCCCAG-------------------GUCCAUGGAUCGAAACCAUGCGGUGCUA--- .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Mitochondrial tRNA import in Toxoplasma gondii. Anne Crausaz Esseiva, Arunasalam Naguleswaran, Andrew Hemphill, André Schneider The Journal of biological chemistry volume: 279 issue: 41 date: Oct. 8, 2004 epub: July 27, 2004 PUBMED ID: 15280394
Comments:	CYTOSOL SPECIFIC- NOT IMPORTED TO MITOCHONDRIA;MODIFIED NUCLEOTIDES WERE NOT DETERMINED

Model based on:

Moderna

RNA Composer