tdbR00000041

NameValue
Coding AA: Asp
Anticodon sequence: 8UC
Organism: Xenopus laevis NCBI:txid8355
RNA type: cytoplasmic
Sequence: UCCUCLUUKGUAPAGUGGDGAGUAUCCCCGCCU8UCA?GCGGGAGA??GGGGTPCAAUUCCCCGACGGGGAGCCA
Unmodified sequence: UCCUCGUUGGUAUAGUGGUGAGUAUCCCCGCCUGUCACGCGGGAGACCGGGGUUCAAUUCCCCGACGGGGAGCCA
Secondary structure: (((((((..((((........)))).(((((.......)))))....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -26.40
Pre-aligned sequence:
Pre-aligned secondary structure:
-UCCUCLUUKGUAPAGU--GGDG-AGUAUCCCCGCCU8UCA?GCGGGAG-------------------A-??GGGGTPCAAUUCCCCGACGGGGAGCCA
.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:
  • The nucleotide sequence of mannosyl-Q-containing tRNAAsp from Xenopus laevis oocytes.
    E Haumont, K Nicoghosian, H Grosjean, R J Cedergren
    Biochimie
    volume: 66 issue: 7-8 PUBMED ID: 6570443
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