tdbR00000093

Name	Value
Coding AA:	Phe
Anticodon sequence:	#AA
Organism:	Bombyx mori NCBI:txid7091
RNA type:	cytoplasmic
Sequence:	GCCGAAAUALCUCAGDDGGGAGAGCRPPAGABU#AAKAPCUAAAG7D?CCUGGTPCA"UCCCGGGUUUCGGCACCA
Unmodified sequence:	GCCGAAAUAGCUCAGUUGGGAGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCAAUCCCGGGUUUCGGCACCA
Secondary structure:	(((((((..((((........)))).(((((.......))))).....(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-21.90
Pre-aligned sequence: Pre-aligned secondary structure:	-GCCGAAAUALCUCAGDD-GGG--AGAGCRPPAGABU#AAKAPCUAAAG-------------------7D?CCUGGTPCA"UCCCGGGUUUCGGCACCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Primary structure of Bombyx mori posterior silkgland tRNAPhe. G Keith, G Dirheimer Biochemical and biophysical research communications volume: 92 issue: 1 date: Jan. 15, 1980 PUBMED ID: 6766719
Comments:	32 PARTIALLY C; 47 PARTIALLY U; 48 MODIFICATION EITHER IN POSITION 48 OR 49

Model based on:

Moderna

RNA Composer