tdbR00000403

NameValue
Coding AA: Ser
Anticodon sequence: UGA
Organism: Bos taurus NCBI:txid9913
RNA type: mitochondrial
Sequence: GAGAGAGACAUAGAGGDUAUGAPGPPGG'UUGA+ACCAAUAGUAGGGGGUPCG"UUCCUUCCUUUCUUACCA
Unmodified sequence: GAGAGAGACAUAGAGGUUAUGAUGUUGGCUUGAAACCAAUAGUAGGGGGUUCGAUUCCUUCCUUUCUUACCA
Secondary structure: (((((((.(((.......))).((((((.......))))))...(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: Feb. 25, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -12.50
Pre-aligned sequence:
Pre-aligned secondary structure:
-GAGAGAG-A-CAUAGA-GG---DUAUGAPGPPGG'UUGA+ACCAAUAG-------------------U-AGGGGGUPCG"UUCCUUCCUUUCUUACCA
.(((((((...(((...........))).((((((.......)))))).......................(((((.......))))))))))))....
Publications:
  • A novel cloverleaf structure found in mammalian mitochondrial tRNA(Ser) (UCN).
    T Yokogawa, Y Watanabe, Y Kumazawa, T Ueda, I Hirao, K Miura, K Watanabe
    Nucleic acids research
    volume: 19 issue: 22 date: Nov. 25, 1991 PUBMED ID: 1840673
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