tdbR00000875

NameValue
Coding AA: Ala
Anticodon sequence: UGC
Organism: Bos taurus NCBI:txid9913
RNA type: mitochondrial
Sequence: GAGGAUUU"LCUUAAUUAAAGULGPUGAUUUGCAUPCAAUUGAUGUAAGGUGPAGUCUUGCAAUCCUUACCA
Unmodified sequence: GAGGAUUUAGCUUAAUUAAAGUGGUUGAUUUGCAUUCAAUUGAUGUAAGGUGUAGUCUUGCAAUCCUUACCA
Secondary structure: (((((((..((((.....))))((((((.......))))))...(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: May 30, 2019, modified: Sept. 23, 2019
Folding free energy [kcal/mol]: -12.30
Pre-aligned sequence:
Pre-aligned secondary structure:
-GAGGAUUU"LCUUAA---UU---AAAGULGPUGAUUUGCAUPCAAUUG-------------------A-UGUAAGGUGPAGUCUUGCAAUCCUUACCA
.(((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))))....
Publications:
  • A complete landscape of post-transcriptional modifications in mammalian mitochondrial tRNAs.
    Takeo Suzuki, Tsutomu Suzuki
    Nucleic acids research
    volume: 42 issue: 11 epub: May 15, 2014 PUBMED ID: 24831542 DOI: 10.1093/nar/gku390
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