tdbR00000887

Name	Value
Coding AA:	Ile
Anticodon sequence:	PAP
Organism:	Saccharomyces cerevisiae NCBI:txid4932
RNA type:	cytoplasmic
Sequence:	GCUCGUGUALCUCAGDGGDDAGAGCUPCGUGCUPAP6ACGCGACC7D?GUGGGTPCA"ACCCCACCPCGAGCACCA
Unmodified sequence:	GCUCGUGUAGCUCAGUGGUUAGAGCUUCGUGCUUAUAACGCGACCGUCGUGGGUUCAAACCCCACCUCGAGCACCA
Secondary structure:	(((((.(..((((........)))).(((((.......))))).....(((((.......)))))).)))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: May 30, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-23.30
Pre-aligned sequence: Pre-aligned secondary structure:	-GCUCGUGUALCUCAGD--GGDD-AGAGCUPCGUGCUPAP6ACGCGACC-------------------7D?GUGGGTPCA"UCCCCACCPCGAGCACCA .(((((.(..((((...........)))).(((((.......)))))........................(((((.......)))))).)))))....
Publications:	Precise analysis of modification status at various stage of tRNA maturation in Saccharomyces cerevisiae. Takayuki Ohira, Kenjyo Miyauchi, Yuriko Sakaguchi, Takeo Suzuki, Tsutomu Suzuki Nucleic acids symposium series (2004) issue: 53 PUBMED ID: 19749380 DOI: 10.1093/nass/nrp151

Model based on:

Moderna

RNA Composer