tdbR00000918

Name	Value
Coding AA:	Thr
Anticodon sequence:	GGU
Organism:	Lactococcus lactis NCBI:txid1358
RNA type:	cytoplasmic
Sequence:	GCCGUUGUAGCUCAGUCGGUAGAGCAGCACCAUGGUAAGGUGAAG7UCGACAGUUCGAUUCUGUUCAAUGGCACCA
Unmodified sequence:	GCCGUUGUAGCUCAGUCGGUAGAGCAGCACCAUGGUAAGGUGAAGGUCGACAGUUCGAUUCUGUUCAAUGGCACCA
Secondary structure:	(((((((..((((........))))..((((.......))))......(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: May 30, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-22.40
Pre-aligned sequence: Pre-aligned secondary structure:	-GCCGUUGUAGCUCAGUC-GGU--AGAGCAGCACCAUGGUAAGGUGAAG-------------------7UCGACAGUUCGAUUCUGUUCAAUGGCACCA .(((((((..((((...........))))..((((.......)))).........................(((((.......))))))))))))....
Publications:	Systematic identification of tRNAome and its dynamics in Lactococcus lactis. Pranav Puri, Collin Wetzel, Paul Saffert, Kirk W Gaston, Susan P Russell, Juan A Cordero Varela, Pieter van der Vlies, Gong Zhang, Patrick A Limbach, Zoya Ignatova, Bert Poolman Molecular microbiology volume: 93 issue: 5 epub: Aug. 6, 2014 PUBMED ID: 25040919 DOI: 10.1111/mmi.12710

Model based on:

Moderna

RNA Composer