tdbR00000959

Name	Value
Coding AA:	Ser
Anticodon sequence:	GGA
Organism:	Streptomyces griseus NCBI:txid1911
RNA type:	cytoplasmic
Sequence:	GGAGGAUUCGCCUAGUGGCCUAGGGCGCACGCJUGGA*AGCGUGUUGGGGGCAACCCCUCACGAGUUCG""UCUCGUAUCCUCCGCCA
Unmodified sequence:	GGAGGAUUCGCCUAGUGGCCUAGGGCGCACGCUUGGAAAGCGUGUUGGGGGCAACCCCUCACGAGUUCGAAUCUCGUAUCCUCCGCCA
Secondary structure:	(((((((..((((.........))))((((((.......))))))...............(((((.......))))))))))))....
Homology model or structure extracted from PDB:	Model Download (by Moderna) Download (by RNA Composer) (last update July 2, 2025)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: May 30, 2019, modified: July 2, 2025
Folding free energy [kcal/mol]:	-27.70
Pre-aligned sequence: Pre-aligned secondary structure:	-GGAGGAUUCGCCUAGU--GGCCUAGGGCGCACGCJUGGA*AGCGUGUUGGGGG--------CAACCCCUCACGAGUUCG""UCUCGUAUCCUCCGCCA .(((((((..((((...........))))((((((.......)))))).......................(((((.......))))))))))))....
Publications:	MODOMICS: a database of RNA modification pathways. 2017 update. Pietro Boccaletto, Magdalena A Machnicka, Elzbieta Purta, Pawel Piatkowski, Blazej Baginski, Tomasz K Wirecki, Valérie de Crécy-Lagard, Robert Ross, Patrick A Limbach, Annika Kotter, Mark Helm, Janusz M Bujnicki Nucleic acids research volume: 46 issue: D1 date: Jan. 4, 2018 PUBMED ID: 29106616 DOI: 10.1093/nar/gkx1030

Model based on:

Moderna

RNA Composer