tdbR00000978

NameValue
Coding AA: Leu
Anticodon sequence: &AG
Organism: Thermoplasma acidophilum NCBI:txid2303
RNA type: cytoplasmic
Sequence: GCGGAGG44GUC(A(ACUGGCCAAAGGCRAUGGAUU&AGKGPCCAUUCCCGAAGGGGUUC7AGGGPPBA"AUCCCUCCCUCCGCACCA
Unmodified sequence: GCGGAGGUUGUCGAGACUGGCCAAAGGCGAUGGAUUUAGGGUCCAUUCCCGAAGGGGUUCGAGGGUUCAAAUCCCUCCCUCCGCACCA
Secondary structure: (((((((..(((.............)))((((((.......)))))).............(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: May 30, 2019, modified: Sept. 18, 2019
Folding free energy [kcal/mol]: -27.10
Publications:
  • Distinct tRNA modifications in the thermo-acidophilic archaeon, Thermoplasma acidophilum.
    Chie Tomikawa, Takayuki Ohira, Yasushi Inoue, Takuya Kawamura, Akihiko Yamagishi, Tsutomu Suzuki, Hiroyuki Hori
    FEBS letters
    volume: 587 issue: 21 date: Nov. 1, 2013 epub: Sept. 25, 2013 PUBMED ID: 24076028 DOI: 10.1016/j.febslet.2013.09.021
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