tdbR00000980

NameValue
Coding AA: Lys
Anticodon sequence: 3UU
Organism: Trypanosoma brucei NCBI:txid5691
RNA type: cytoplasmic
Sequence: GCCUUCCUALCUCAGDGGXAGAGCRCACGGBU3UUÿACCGUGUG7Ð?GUGGGTPCGAUCCCCACGGAAGGCGCCA
Unmodified sequence: GCCUUCCUAGCUCAGUGGUAGAGCGCACGGCUUUUAACCGUGUGGUCGUGGGUUCGAUCCCCACGGAAGGCGCCA
Secondary structure: (((((((..((((.......))))((((((.......))))))....(((((.......))))))))))))....
Homology model or
structure extracted from PDB:
Model Download (last update Sept. 6, 2019)
Prepared by: Database creators
Version: 1 (Sept. 6, 2019), created: May 30, 2019, modified: Sept. 18, 2019
Folding free energy [kcal/mol]: -32.90
Publications:
  • Identification of 2-methylthio cyclic N6-threonylcarbamoyladenosine (ms2ct6A) as a novel RNA modification at position 37 of tRNAs.
    Byeong-Il Kang, Kenjyo Miyauchi, Michal Matuszewski, Gabriel Silveira D'Almeida, Mary Anne T Rubio, Juan D Alfonzo, Kazuki Inoue, Yuriko Sakaguchi, Takeo Suzuki, Elzbieta Sochacka, Tsutomu Suzuki
    Nucleic acids research
    volume: 45 issue: 4 date: Feb. 28, 2017 PUBMED ID: 27913733 DOI: 10.1093/nar/gkw1120
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