tdbPDB000006

Name	Value
Coding AA:	Ile
Anticodon sequence:	CAU
Organism:	Archaeoglobus fulgidus NCBI:txid2234
RNA type:	cytoplasmic
Sequence:	gGGCCCGUAGCUUAGCCAGGUCAGAGCGCCCGGCUCAUAACCGGGCGGUCGAGGGUUCGAAUCCCUCCGGGCCCACCA
Unmodified sequence:	gGGCCCGUAGCUUAGCCAGGUCAGAGCGCCCGGCUCAUAACCGGGCGGUCGAGGGUUCGAAUCCCUCCGGGCCCACCA
Secondary structure:	(((((((..((((..........)))).((((.........)))).....(((((.......))))))))))))....
PDB ID:	3amt, 3amu
Homology model or structure extracted from PDB:	Extracted Download (last update Sept. 6, 2019)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: May 30, 2019, modified: June 26, 2025
Folding free energy [kcal/mol]:	-31.20
Pre-aligned sequence: Pre-aligned secondary structure:	-gGGCCCGUAGCUUAGCCAGGUC-AGAGCGCCCGGCUCAUAACCGGGCG-------------------GUCGAGGGUUCGAAUCCCUCCGGGCCCACCA .(((((((..((((...........)))).((((.........))))........................(((((.......))))))))))))....
Publications:	Structural basis of tRNA agmatinylation essential for AUA codon decoding. Takuo Osawa, Satoshi Kimura, Naohiro Terasaka, Hideko Inanaga, Tsutomu Suzuki, Tomoyuki Numata Nature structural & molecular biology volume: 18 issue: 11 date: Oct. 16, 2011 epub: Oct. 16, 2011 PUBMED ID: 22002223 DOI: 10.1038/nsmb.2144

Model based on:

Moderna