tdbPDB000007

Name	Value
Coding AA:	Ile
Anticodon sequence:	CAU
Organism:	Geobacillus kaustophilus NCBI:txidna
RNA type:	cytoplasmic
Sequence:	gGACCUUUAGCUCAGUUGGUUAGAGCAGACGGCUCAUAACCGUCCGGCCGUAGGUUCGAGUCCUACAAGGUCCACCA
Unmodified sequence:	gGACCUUUAGCUCAGUUGGUUAGAGCAGACGGCUCAUAACCGUCCGGCCGUAGGUUCGAGUCCUACAAGGUCCACCA
Secondary structure:	(((((((..((((.........)))).(((((.......))))).....(((((.......))))))))))))....
PDB ID:	3a2k
Homology model or structure extracted from PDB:	Model Download (by Moderna) (last update Sept. 6, 2019)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: May 30, 2019, modified: June 26, 2025
Folding free energy [kcal/mol]:	-27.20
Pre-aligned sequence: Pre-aligned secondary structure:	-gGACCUUUAGCUCAGUU-GGUU-AGAGCAGACGGCUCAUAACCGUCCG-------------------GCCGUAGGUUCGAGUCCUACAAGGUCCACCA .(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Publications:	Structural basis for translational fidelity ensured by transfer RNA lysidine synthetase. Kotaro Nakanishi, Luc Bonnefond, Satoshi Kimura, Tsutomu Suzuki, Ryuichiro Ishitani, Osamu Nureki Nature volume: 461 issue: 7267 date: Oct. 22, 2009 PUBMED ID: 19847269 DOI: 10.1038/nature08474

Model based on:

Moderna