tdbPDB000010

Name	Value
Coding AA:	Lys
Anticodon sequence:	UUU
Organism:	Homo sapiens NCBI:txid9606
RNA type:	cytoplasmic
Sequence:	GGCCCGGAUAGCUCagUCGGUAGAGCAUCAGACUUUUAAUCUGAGGGUCCAGGGUUCAaGUCCCUGUUCGGGCGCCa
Unmodified sequence:	GGCCCGGAUAGCUCagUCGGUAGAGCAUCAGACUUUUAAUCUGAGGGUCCAGGGUUCAaGUCCCUGUUCGGGCGCCa
Secondary structure:	.(((((((..((((........)))).(((((.(...).))))).....(((((.......))))))))))))....
PDB ID:	5ccb, 5ccx, 5cd1
Homology model or structure extracted from PDB:	Extracted Download (last update Sept. 6, 2019)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: May 30, 2019, modified: June 26, 2025
Folding free energy [kcal/mol]:	-25.50
Pre-aligned sequence: Pre-aligned secondary structure:	GGCCCGGAUAGCUCagUC-GGU--AGAGCAUCAGACUUUUAAUCUGAGG-------------------GUCCAGGGUUCAaGUCCCUGUUCGGGCGCCa .(((((((..((((...........)))).(((((.(...).)))))........................(((((.......))))))))))))....
Publications:	Crystal Structure of the Human tRNA m(1)A58 Methyltransferase-tRNA(3)(Lys) Complex: Refolding of Substrate tRNA Allows Access to the Methylation Target. Janet Finer-Moore, Nadine Czudnochowski, Joseph D O'Connell, Amy Liya Wang, Robert M Stroud Journal of molecular biology volume: 427 issue: 24 date: Dec. 4, 2015 epub: Oct. 22, 2015 PUBMED ID: 26470919 DOI: 10.1016/j.jmb.2015.10.005

Model based on:

Moderna