tdbPDB000012

Name	Value
Coding AA:	Met_ini
Anticodon sequence:	CAU
Organism:	Escherichia coli NCBI:txid562
RNA type:	cytoplasmic
Sequence:	cGCGGGGcGGAGCAGCCUGGUAGCUCGUCGGGcUCAUAACCCGAAGAUCGUCGGuUCAAAUCCGGCCCCCGCAACCA
Unmodified sequence:	cGCGGGGcGGAGCAGCCUGGUAGCUCGUCGGGcUCAUAACCCGAAGAUCGUCGGuUCAAAUCCGGCCCCCGCAACCA
Secondary structure:	.((((((..((((......[..)))).(((((.......))))).....(((((..]....))))))))))).....
PDB ID:	3cw5, 3cw6, 5l4o
Homology model or structure extracted from PDB:	Extracted Download (last update Sept. 6, 2019)
Prepared by:	Database creators
Version:	1 (Sept. 6, 2019), created: May 30, 2019, modified: June 26, 2025
Folding free energy [kcal/mol]:	-30.00
Pre-aligned sequence: Pre-aligned secondary structure:	-cGCGGGGcGGAGCAGCCUGGU--AGCUCGUCGGGcUCAUAACCCGAAG-------------------AUCGUCGGuUCAAAUCCGGCCCCCGCAACCA ..((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))).....
Publications:	A unique conformation of the anticodon stem-loop is associated with the capacity of tRNAfMet to initiate protein synthesis. Pierre Barraud, Emmanuelle Schmitt, Yves Mechulam, Frédéric Dardel, Carine Tisné Nucleic acids research volume: 36 issue: 15 epub: July 24, 2008 PUBMED ID: 18653533 DOI: 10.1093/nar/gkn462

Model based on:

Moderna